EMBnet 20th Anniversary Conference - List of abstracts.
You can download the Book of Abstracts (PDF) for the Conference EMBnet 20th Anniversary Conference.
Click here to see the number of abstracts per participating countries
List of abstracts accepted for poster presentation
| Abstract | Country | Abstract Title |
| 1 | France | HOMOLOGOUS GENE FAMILIES DATABASES FOR COMPARATIVE GENOMICS |
| 2 | Italy | THE GENIUS GRID PORTAL AND THE ROBOT CERTIFICATES : A NEW TOOL FOR E-SCIENCE |
| 3 | Cuba | IN SILICO PREDICTION OF ESCAPE MUTANTS OF THE HIV-1 PROTEASE |
| 4 | Italy | MASSIVE NON NATURAL PROTEINS STRUCTURE PREDICTION USING GRID TECHNOLOGIES |
| 5 | France | NORINE: A PUBLIC RESOURCE FOR NONRIBOSOMAL PEPTIDES |
| 6 | USA | MOLECULAR DINAMIC OF ACTIVE SITE REGION OF MONILIPHOTHORA PERNICIOSA CHITIN SYNTHASE, THE AGENT OF WITCHES’ BROOM DISEASE OF COCOA |
| 7 | France | GPU ACCELERATED RNA-RNA INTERACTION ALGORITHM |
| 8 | Greece | CONTRIBUTIONS OF GC ON GENE EXPRESSION: RECOGNIZING THE ROLES OF GC |
| 9 | Brazil | CREATION OF A CULTURE COLLECTION DATABASE OF DIAZOTROPHIC AND PLANT GROWTH PROMOTER BACTERIA OF EMBRAPA SOJA |
| 10 | France | METAGENOME ANNOTATION: AN OPPORTUNITY FOR UNDERGRADUATE BIOINFORMATICS TEACHING |
| 11 | Australia | SPRINTS AT GENESILICO - SOFTWARE ENGINEERING TECHNIQUES IN A BIOINFORMATICS LAB |
| 12 | France | WHEN DATA INTEGRATION LEADS TO A NEW CONCEPT : THE ORPHAN ENZYMES |
| 13 | Italy | BIOSTATISTICS APPLIED ON FOOD GENOMICS |
| 14 | Italy | “HARDY–WEINBERG KERNEL”: A NEW SIMILARITY MEASURE FOR THE ANALYSIS OF GENETIC DATA IN COMPLEX PHENOTYPES |
| 15 | Italy | CHARACTERIZATION AND ANALYSIS OF THE EXPRESSION PATTERN OF MICRORNAS IN THE GRAPEVINE VITIS VINIFERA |
| 16 | Romania | AUTOMATIC INFERRING DRUG GENE REGULATORY NETWORKS USING COMPUTATIONAL INTELLIGENCES TOOLS |
| 17 | Cuba | A STRUCTURE-ACTIVITY STUDY OF CEPHALOSPORINS EMPLOYING SUPPORT VECTOR MACHINES |
| 18 | Cuba | A NEW TOOL FOR THE PREDICTION OF BIOLOGICAL ACTIVITY USING COMPUTER NETWORK |
| 19 | Sweden | ZEBRAFISH INTERACTOME IN ANALYSIS OF DIOXIN TOXICITY |
| 20 | Switzerland | HE MYCOPLASMA CONJUNCTIVAE GENOME SEQUENCING, ANNOTATION AND ANALYSIS |
| 21 | USA | DNA BARCODE ANALYSIS OF FOURTEEN SNAKE CRUDE VENOMS BOUGHT FROM PRIVATE FACILITIES |
| 22 | USA | GOMIR: A STAND ALONE APPLICATION FOR HUMAN MICRORNA TARGET ANALYSIS AND GENE ONTOLOGY CLUSTERING |
| 23 | UK | TOWARDS SEMANTIC INTEROPERABILITY OF BIOINFORMATICS TOOLS AND BIOLOGICAL DATABASES |
| 24 | Finland | CHIPSTER – USER FRIENDLY ANALYSIS SOFTWARE FOR DNA MICROARRAY DATA |
| 25 | Finland | BRUKIN2D’: A 2D VISUALIZATION AND COMPARISON TOOL FOR LC-MS DATA |
| 26 | Sweden | RETROTECTOR ONLINE, A RATIONAL TOOL FOR ANALYSIS OF RETROVIRAL ELEMENTS IN SMALL AND MEDIUM SIZE VERTEBRATE GENOMIC SEQUENCES |
| 27 | South Korea | A SCIENTIFIC WORKFLOW APPROACH FOR THE INTEGRATION OF BIOINFORMATICS TOOLS |
| 28 | Greece | GIBA: A CLUSTERING TOOL FOR DETECTING PROTEIN COMPLEXES |
| 29 | Kenya | TPARVADB: A DATABASE TO SUPPORT THEILERIA PARVA VACCINE DEVELOPMENT |
| 30 | France | A GREATER DIVERSITY OF RIBOSWITCHES IDENTIFIED THROUGH THE PRESENCE OF ALTERNATIVE STRUCTURES AND OTHER CONSTRAINTS |
| 31 | Spain | PHD-SNP1.0: A WEB SERVER FOR THE PREDICTION OF HUMAN GENETIC DISEASES ASSOCIATED TO MISSENSE SINGLE NUCLEOTIDE POLYMORPHISMS |
| 32 | Sweden | A CHEMOGENOMICS VIEW OF PROTEIN-LIGAND SPACES |
| 33 | France | DECIPHERING THE CONNECTIVITY STRUCTURE OF BIOLOGICAL NETWORKS USING MIXNET |
| 34 | Nigeria | COMPARISON OF ABC TRANSPORTER GENES OF PLASMODIUM SPECIES: A SEARCH IN ELUCIDATING NEW DISCOVERIES TOWARD MALARIA PARASITE ERADICATION |
| 35 | Italy | THE EFFECT OF SINGLE MUTATIONS ON THE CARRIER ACTIVITY OF THE DICARBOXYLATE CARRIER (DIC) OF S. CEREVISIAE: IN VITRO VALIDATION OF PREDICTIONS OF PROTEIN STABILITY CHANGES |
| 36 | France | IMGT/LIGMOTIF: A TOOL FOR IMMUNOGLOBULIN AND T CELL RECEPTOR GENE IDENTIFICATION AND DESCRIPTION IN LARGE GENOMIC SEQUENCES |
| 37 | Spain | FUNCTIONAL ASSESSMENT OF TIME COURSE MICROARRAY DATA |
| 38 | Germany | ANALYSING GENE EXPRESSION PATTERNS IN THE METABOLIC NETWORK OF NEUROBLASTOMA TUMOURS WITH WAVELET TRANSFORMS |
| 39 | Italy | INFERRING THE ASSOCIATION OF GENOMIC EXPRESSION AND COPY NUMBER VARIATION |
| 40 | Spain | EMBOSS ON THE GRID WITH EMBOSS-GUI |
| 41 | China | TRANSCRIPTION FACTORS REGULATION OF HUMAN GENE NETWORK |
| 42 | Belgium | GRID-BASED BUSINESS-TO-ACADEMIA COLLABORATIONS |
| 43 | Iran | THE INTERPRETATION OF PROTEIN STRUCTURES BASED ON GRAPH THEORY |
| 44 | Sweden | MOLMETH: THE MOLECULAR METHODS DATABASE |
| 45 | Iran | A GREEDY ALGORITHM FOR HAPLOTYPE INFERENCE BY PURE PARSIMONY |
| 46 | Italy | GAINS AND LOSSES OF LINEAGE-SPECIFIC GROUP II INTRON IN MITOCHONDRIA OF GYMNOSPERMS: MOLECULAR EVOLUTIONARY AND PHYLOGENETIC IMPLICATIONS |
| 47 | Slovakia | GENE REGULATORY NETWORKS IN BACTERIOPHAGES |
| 48 | China | THE DIVERGENCE OF EXPRESSION PATTERNS OF DUPLICATED GENES IN ORYZA SATIVA |
| 49 | Italy | ENGINEDB: A REPOSITORY OF FUNCTIONAL ANALOGUES |
| 50 | Italy | PHYLOGENETIC DATABASE QUERY SYSTEM FOR SPECIES DETERMINATION |
| 51 | Germany | COMPARING THE BIOCHEMICAL NETWORKS OF HUMAN AND RODENT CELLS INFECTED WITH DIFFERENT PLASMODIUM SPECIES |
| 52 | Italy | STATISTICAL ASSESSMENT OF DISCRIMINATIVE FEATURES FOR PROTEIN-CODING AND NON CODING CROSS-SPECIES CONSERVED SEQUENCE ELEMENTS |
| 53 | Italy | COMPUTATIONAL ANNOTATION OF UTR CIS-REGULATORY MODULES THROUGH FREQUENT PATTERN MINING |
| 55 | France | IMGT/V-QUEST: AN ALGORITHM FOR IMMUNOGLOBULIN AND T CELL RECEPTOR SEQUENCE ANALYSIS |
| 56 | Italy | HTC FOR ASPIC: A DISTRIBUTED WEB RESOURCE FOR ALTERNATIVE SPLICING PREDICTION AND TRANSCRIPT ISOFORM CHARACTERIZATION |
| 57 | Germany | GIBBS FREE ENERGY CHANGES OF BIOCHEMICAL REACTIONS INFERRED FROM REACTION SIMILARITIES |
| 58 | Chile | IS IT POSSIBLE TO PREDICT PROTEIN BEHAVIOR IN HYDROPHOBIC INTERACTION CHROMATOGRAPHY AND AQUEOUS TWO-PHASE SYSTEMS USING ONLY THEIR AMINO ACID COMPOSITION? |
| 59 | Chile | IMPROVING THE PREDICTION OF PROTEIN BEHAVIOR IN HYDROPHOBIC INTERACTION CHROMATOGRAPHY AND AQUEOUS TWO-PHASE SYSTEMS WITH CLUSTERING METHODS |
| 60 | Chile | MODELING HETEROCYST PATTERN FORMATION IN CYANOBACTERIA |
| 61 | India | IDER ASSOCIATED PHYSIOLOGICAL NETWORK IN MYCOBACTERIA |
| 62 | India | CORYNEDB: A DATABASE OF IN SILICO IDENTIFIED OPERONS AND TRANSCRIPTIONAL UNITS OF CORYNEBACTERIA |
| 63 | Hungary | DOOPSEARCH: A WEB-BASED TOOL FOR FINDING AND ANALYZING COMMON CONSERVED MOTIFS IN THE PROMOTER REGIONS OF DIFFERENT CHORDATE AND PLANT GENES |
| 64 | Poland | BRAGOMAP - A NEW PERL SCRIPT FOR HIGH THROUGHOUTPUT BLAST RESULTS ANALYSIS INCLUDING GO AND MAPMAN AUTOMATIC ANNOTATIONS |
| 65 | Iran | IMPROVING GENE RANKING METHODS USING FUZZY CLUSTERING AND GENE ONTOLOGY |
| 66 | Sweden | GENEFINDER: "IN SILICO" POSITIONAL CLONING OF TRAIT GENES |
| 67 | Brazil | CONTACT COORDINATION PATTERNS AND ELECTROSTATIC POTENTIAL AT ALPHA CARBON ATOMS: A DOSSIER OF PROTEIN SECONDARY STRUCTURE ELEMENTS |
| 68 | Sweden | INTEGRATING ERV SEQUENCE AND STRUCTURAL FEATURES WITH DAS AND EBIOX |
| 69 | Italy | THE RHNUMTS COMPILATION |
| 70 | Colombia Switzerland | STORING, CLASSIFICATION AND BETA-LACTAMASE SEQUENCE MOLECULAR PATRONS DETECTION |
| 71 | Russia | DETECTING HYDROPHOBIC CLUSTERS IN 3D STRUCTURES AT ATOMIC LEVEL |
| 72 | Italy | TOWARDS BARCODE MARKERS IN FUNGI: AN INTRON MAP OF ASCOMYCOTA MITOCHONDRIA. |
| 73 | Italy | REGEXPBLASTING, A REGULAR EXPRESSION RULES BASED ALGORITHM TO CLASSIFY A NEW SEQUENCE |
| 74 | Pakistan | POSSIBLE ROLE FOR PROXIMITY OF GENES IN THEIR EXPRESSION IN RICE AND ARABIDOPSIS |
| 75 | Italy | A BIOINFORMATICS PLATFORM TO STORE AND ANALYZE ALTERNATIVE SPLICING EVENTS DETECTED BY EXON ARRAYS |
| 76 | Italy | EASYCLUSTER: A FAST AND EFFICIENT GENE-ORIENTED CLUSTERING TOOL FOR LARGE-SCALE TRANSCRIPTOME DATA |
| 77 | France | GNPIS, THE PLANT INFORMATION SYSTEM OF INRA URGI BIOINFORMATICS PLATFORM |
| 78 | Italy | A BIOINFORMATICS KNOWLEDGE DISCOVERY APPLICATION FOR GRID COMPUTING |
| 79 | Italy | THE LIBI PROJECT: A VIRTUAL LABORATORY FOR BIOINFORMATICS |
Number of abstracts per participating country:
|
Country
|
Number of Abstracts
|
| Australia |
1
|
| Belgium |
1
|
| Brazil |
2
|
| Chile |
3
|
| China |
2
|
| Colombia | 1 |
| Cuba |
3
|
| Finland |
2
|
| France |
10
|
| Germany |
3
|
| Greece |
2
|
| Hungary |
1
|
| India |
2
|
| Iran |
3
|
| Italy |
20
|
| Kenya |
1
|
| Nigeria |
1
|
| Pakistan |
1
|
| Poland |
1
|
| Romania |
1
|
| Russia |
1
|
| Slovakia |
1
|
| South Korea |
1
|
| Spain |
3
|
| Sweden |
6
|
| Switzerland |
2
|
| UK |
1
|
| USA |
3
|
| Attachment | Size |
|---|---|
| Abstracts-EMBnetConference2008.pdf | 389.21 KB |